Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900537.1_cds_XP_016450568.1_45004
CDS Infomation

[gene=LOC107775355] [db_xref=GeneID:107775355] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016450568.1] [location=complement(join(18009..19433,20495..20578,20767..20835))] [gbkey=CDS]
Sequence

ATGGCACAGCATATTGAGATTACCCCACTGCTTGATCAAACTCCTCCAAATGAAGCTAGT
AAAGATGAGTCGCCAGCTCGCCCGCGGTTGCTAAAGCCTTCACCCACTGCCGCTACTTCT
TTCTTCGCCTTTGCCGTCGCCAGTCATCAAGTGATACAAGAAGGTGGGAAAGCGGATTAT
GTAATCGAGATAAGGACAGCAGATCAAACAAATGAATCAACAAATCAAGTCTTTGATGAA
GGATCATCTACCATATTTAAAGTAAATGTGGGGCTATGTGAATCAAATCCAGATGCTTAT
ATCCCAAAGTTGATCTCCATTGGTCCTTACCATAAAAAGAATCCGAGACTTCGCTCGATG
GAAAAATATAAACTGCGTTACCAACAACGATTTCTGCAGAGGAAAGCATGGAGAGATGTG
GAGTATTACATTAGTGAAATGGAGAAACTAAAGGATGAAGCACTAAAGTGTTACGATGAT
ATAGGGGACCTTGAAAGTGATATTATTAGCAAATTTTCAGATTTGCTGTTACTTGATGGC
TGCTTCGTGGTTGAGTATATCCGAGAGTTTTACGAAGGGGTGCCAGAAGGAGAAGACAAG
ATTATCGACGCGGCTTGGATGGAATCTCTAGTAGATCGTGACTTATTGTTACTAGAAAAC
CAACTTCCTTTCTTTATCCTCGCCAAACTTCACGAGATGACTAAGGATCCTACAGACGCC
CCATTTATACAGATGGTGAAATACAACTTTGGTAGTAGTTTACCAAAAGTGACTCCTAAA
TTCATAAATGCAACTGATGATGATGATGCCGAAGAAATCAAACATTTACTTCAAGTAGTA
CACATGTGTTGTTGCCCTTCAGAGATGAACACTGGCCTAACTAGGAATAGCAGAAAGAAA
AAAGGAAGTAGCAAGAAAAGCTGTAACTGGAATCCTTTGCGAATTGGTAAGTCCAAAAAG
AAGTTTAAAACTAAGGACGGCGACTTATGGCACGATCGCATGCGAAGTGCAACAGAACTT
GATGAAGCTGGAATTCGCTTCTCAAATGTTGGGAAAATTTATAGAAAGTTGAACAAAAAC
AACAAAGAGGATGCTATAAGTTTATTTGATATCAAATTCAATAACGGATTGCTTGAAATC
CCTTGTTTTGAGGTCGTTAATAGTACAGAGACTATTCTGAGAAATCTCATTGCCTACGAA
CAACACTCATCTGATGTGCATCCGAAATATTTCACGGATTATGTAATCTTTATGGACCAT
CTTATTAACTCAGGCAAAGATGTGAATTTGCTTCGGTTGAACGGAATTATCAGAAATAGG
ATAGGAGATGACGAAGAAGTGGCTATCATGTTCAACAAACTAGGAGAAGGTGTCATCCCT
TCAACTGATTTCTTTTACAAAGTGGAATGCAGAAAAGTGATTGAGCATTGTGAAAAACCA
TGGAATGAAAACATGGCAAGTTTGAGGCATAATTATCTTAATAGCCCTTGGGCGAAAATT
TCAACTGCGGCAGCCATCATTCTCCTTCTGCTTACAGTTGCACAAACAGTTCTAGCTCTC
ATCAGTACTTTAAAGTAG

Peptide Sequence

PEP ID

XP_016450568.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MAQHIEITPLLDQTPPNEASKDESPARPRLLKPSPTAATSFFAFAVASHQVIQEGGKADY
VIEIRTADQTNESTNQVFDEGSSTIFKVNVGLCESNPDAYIPKLISIGPYHKKNPRLRSM
EKYKLRYQQRFLQRKAWRDVEYYISEMEKLKDEALKCYDDIGDLESDIISKFSDLLLLDG
CFVVEYIREFYEGVPEGEDKIIDAAWMESLVDRDLLLLENQLPFFILAKLHEMTKDPTDA
PFIQMVKYNFGSSLPKVTPKFINATDDDDAEEIKHLLQVVHMCCCPSEMNTGLTRNSRKK
KGSSKKSCNWNPLRIGKSKKKFKTKDGDLWHDRMRSATELDEAGIRFSNVGKIYRKLNKN
NKEDAISLFDIKFNNGLLEIPCFEVVNSTETILRNLIAYEQHSSDVHPKYFTDYVIFMDH
LINSGKDVNLLRLNGIIRNRIGDDEEVAIMFNKLGEGVIPSTDFFYKVECRKVIEHCEKP
WNENMASLRHNYLNSPWAKISTAAAIILLLLTVAQTVLALISTLK

Transcript Sequence

Gene sequence data has not been registered.